From: BicPAMS: software for biological data analysis with pattern-based biclustering
ID | Type | ♯Nodes |I|×|J| | Items | ♯Enriched terms | Details | |
---|---|---|---|---|---|---|
DryGIN | G1 | constant | 18 ×9 | {-4,..,-1} | 27 | Module with coherently strong (–4) and soft (–1) negative interactions. |
G2 | symmetric | 4 ×9 | {-3,..,3} | 13 | Module with multiple levels of strong (mainly positive) interactions ({ ±3,±2}). | |
G3 | symmetric | 5 ×6 | {-2,-1,1,2} | 12 | Module with either all negative or positive interactions per “row”-node ({ ±1,±2}). | |
G4 | constant | 7 ×5 | {1,2} | 12 | Module with coherent strong (2) and soft (1) positive interactions. | |
G5 | symmetric | 7 ×5 | {-2,-1,1,2} | 11 | Module with either all negative or positive interactions per “row”-node ({ ±1,±2}). | |
G6 | order | 14 ×11 | {-3,..,3} | 25 | Preserved precedences and co-occurrences per “row”-node before postprocessing. | |
G7 | order | 42 ×8 | {-2,-1,1,2} | 50 | Noise-tolerant module with mostly preserved orderings per “row”-node. |