Table 5 The averages of the number of estimated edges and the five performance measures over 50 datasets
From: Enhanced construction of gene regulatory networks using hub gene information
p | n | \(\sigma _{\epsilon }^{2}\) | Method | \(|\hat {E}|\) | SEN | SPE | FDR | MISR | MCC |
|---|---|---|---|---|---|---|---|---|---|
231 | 115 | 0 | SPACE | 160.38 | 46.90 | 99.91 | 14.78 | 0.67 | 62.85 |
(|E|=290) | Â | Â | Â | (2.39) | (0.43) | (0.01) | (0.69) | (0.00) | (0.28) |
| Â | Â | Â | ESPACE | 172.74 | 49.41 | 99.89 | 16.95 | 0.66 | 63.74 |
| Â | Â | Â | Â | (1.58) | (0.39) | (0.00) | (0.41) | (0.00) | (0.31) |
| Â | Â | 0.01 | SPACE | 156.00 | 45.97 | 99.91 | 14.06 | 0.68 | 62.45 |
| Â | Â | Â | Â | (2.79) | (0.57) | (0.01) | (0.66) | (0.00) | (0.33) |
| Â | Â | Â | ESPACE | 153.16 | 45.79 | 99.92 | 12.85 | 0.67 | 62.78 |
| Â | Â | Â | Â | (2.64) | (0.55) | (0.01) | (0.67) | (0.00) | (0.34) |
| Â | Â | 0.1 | SPACE | 106.08 | 32.61 | 99.96 | 9.15 | 0.78 | 53.07 |
| Â | Â | Â | Â | (5.11) | (1.41) | (0.00) | (0.80) | (0.01) | (1.21) |
| Â | Â | Â | ESPACE | 104.30 | 32.31 | 99.96 | 8.64 | 0.78 | 53.15 |
| Â | Â | Â | Â | (4.96) | (1.37) | (0.00) | (0.73) | (0.01) | (1.10) |
| Â | Â | 0.25 | SPACE | 44.76 | 14.81 | 99.99 | 3.63 | 0.94 | 37.27 |
| Â | Â | Â | Â | (1.75) | (0.54) | (0.00) | (0.42) | (0.01) | (0.62) |
| Â | Â | Â | ESPACE | 49.14 | 16.12 | 99.99 | 4.59 | 0.92 | 38.79 |
| Â | Â | Â | Â | (1.47) | (0.45) | (0.00) | (0.41) | (0.00) | (0.53) |
| Â | Â | 0.5 | SPACE | 55.88 | 14.97 | 99.95 | 22.20 | 0.98 | 33.81 |
| Â | Â | Â | Â | (0.90) | (0.25) | (0.00) | (0.72) | (0.00) | (0.37) |
| Â | Â | Â | ESPACE | 57.34 | 15.32 | 99.95 | 22.49 | 0.97 | 34.14 |
| Â | Â | Â | Â | (1.03) | (0.31) | (0.00) | (0.69) | (0.00) | (0.44) |
| Â | 231 | 0 | SPACE | 235.54 | 68.37 | 99.86 | 15.62 | 0.49 | 75.68 |
| Â | Â | Â | Â | (2.20) | (0.35) | (0.01) | (0.50) | (0.00) | (0.22) |
| Â | Â | Â | ESPACE | 235.86 | 69.35 | 99.87 | 14.55 | 0.47 | 76.72 |
| Â | Â | Â | Â | (1.99) | (0.32) | (0.01) | (0.49) | (0.00) | (0.23) |
| Â | Â | 0.01 | SPACE | 230.90 | 67.54 | 99.87 | 15.00 | 0.49 | 75.50 |
| Â | Â | Â | Â | (2.11) | (0.34) | (0.01) | (0.46) | (0.00) | (0.21) |
| Â | Â | Â | ESPACE | 231.86 | 68.54 | 99.87 | 14.05 | 0.47 | 76.49 |
| Â | Â | Â | Â | (2.21) | (0.33) | (0.01) | (0.55) | (0.01) | (0.24) |
| Â | Â | 0.1 | SPACE | 214.30 | 62.28 | 99.87 | 15.48 | 0.54 | 72.25 |
| Â | Â | Â | Â | (2.22) | (0.37) | (0.01) | (0.53) | (0.00) | (0.25) |
| Â | Â | Â | ESPACE | 214.04 | 63.22 | 99.88 | 14.07 | 0.52 | 73.41 |
| Â | Â | Â | Â | (2.33) | (0.35) | (0.01) | (0.56) | (0.00) | (0.22) |
| Â | Â | 0.25 | SPACE | 184.76 | 54.10 | 99.89 | 14.77 | 0.61 | 67.57 |
| Â | Â | Â | Â | (2.38) | (0.43) | (0.01) | (0.60) | (0.00) | (0.27) |
| Â | Â | Â | ESPACE | 181.02 | 54.52 | 99.91 | 12.53 | 0.58 | 68.78 |
| Â | Â | Â | Â | (1.42) | (0.27) | (0.00) | (0.42) | (0.00) | (0.21) |
| Â | Â | 0.5 | SPACE | 112.28 | 35.38 | 99.96 | 7.89 | 0.74 | 56.55 |
| Â | Â | Â | Â | (3.23) | (0.82) | (0.00) | (0.61) | (0.01) | (0.54) |
| Â | Â | Â | ESPACE | 123.06 | 38.58 | 99.96 | 8.48 | 0.71 | 58.98 |
| Â | Â | Â | Â | (2.80) | (0.65) | (0.00) | (0.60) | (0.00) | (0.37) |