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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Across-proteome modeling of dimer structures for the bottom-up assembly of protein-protein interaction networks

Fig. 4

Distribution of various components to the binding energy calculated with FiberDock. Negative pairs from the RND14944 dataset and positive pairs from the HET3519 dataset are shown as white and gray boxes, respectively. The following normalized (Z-score) energy terms are shown: (a) global energy, (b) attractive van der Waals potential, (c) repulsive van der Waals potential, (d) atomic contact energy, (e) internal energy, and (f) hydrogen bond potential. Boxes end at quartiles Q1 and Q3 and a horizontal line in each box is the median. Whiskers point at the farthest points that are within 1.5 of the interquartile range

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BMC Bioinformatics

ISSN: 1471-2105

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