Skip to main content

Table 1 Overview: Leveraged information per algorithm

From: EPSILON-CP: using deep learning to combine information from multiple sources for protein contact prediction

Algorithm

Physicochemistry

Evolutionary

Sequence

Features

EPC-map

✓

✓(1)

 

228

MemBrain

 

✓(1)

✓

400/200

BCL::Contact

✓

 

✓

90

PhyCMAP

 

✓(2)

✓

≈300

PConsC

 

✓(2)

✓

252

MetaPSICOV

 

✓(3)

✓

672/731

EPSILON-CP

✓

✓(5)

✓

171

  1. The number of features specified for MetaPSICOV refer to Stage1/ Stage2. The number of features specified for MemBrain refer to the serial/parallel combination. The first part of the table contains methods that linearly combine the features/high-level predictions, the second part non-linearly. The numbers in parentheses for evolutionary information denote the number of different methods utilized