BMC Bioinformatics

Table 1 Results of the Arabidopsis thaliana genome stepwise assembling in four sets (parts) using the CLC Assembly Cell software

From: Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb)

Assembly part	Total length, Mbp	Contigs
Assembly part	Total length, Mbp	N50, bp	Number	Mean length, bp
1^a	101.2	1586	110,067	919
2^a	101.2	1601	109,903	920
3^a	101.2	1595	110,119	919
4^b	101.2	1586	110,384	916
1 + 2	113.2	3225	64,543	1753
1 + 2 + 3	116.6	3861	60,606	1923
1 + 2 + 3 + 4	113.7	4325	52,576	2161

^aRepresents approximately 1/3 of all original reads; ^bRepresents also approximately 1/3 of all original reads, but randomly selected

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ISSN: 1471-2105

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