Variable name | Formula | BS |
---|---|---|
F1 | ∑iexpr(miRNAi) × BSij × expr(mRNAj) | number in 3’UTR |
F2 | ∑iexpr(miRNAi) × BSij | number in 3’UTR |
F3 | ∑iBSij × expr(mRNAj) | number in 3’UTR |
F4 | ∑iBSij | number in 3’UTR |
F1d | ∑iexpr(miRNAi) × dBSij × expr(mRNAj) | density in 3’UTR |
F2d | ∑iexpr(miRNAi) × dBSij | density in 3’UTR |
F3d | ∑idBSij × expr(mRNAj) | density in 3’UTR |
F4d | ∑idBSij | density in 3’UTR |
F5 | ∑iexpr(miRNAi) × BSij × expr(mRNAj) | number in coding region |
F6 | ∑iexpr(miRNAi) × BSij | number in coding region |
F7 | ∑iBSij × expr(mRNAj) | number in coding region |
F8 | ∑iBSij | number in coding region |
F5d | ∑iexpr(miRNAi) × dBSij × expr(mRNAj) | density in coding region |
F6d | ∑iexpr(miRNAi) × dBSij | density in coding region |
F7d | ∑idBSij × expr(mRNAj) | density in coding region |
F8d | ∑idBSij | density in coding region |
F9 | expr(mRNAj) | Not applicable |
L1 | length of 3’UTR | Not applicable |
L2 | length of coding region | Not applicable |