Table 1 Phase 2 Places
From: Spatial quorum sensing modelling using coloured hybrid Petri nets and simulative model checking
Place name | Biological entity |
|---|---|
Adenine | Adenine |
AI2_In_Phase2 | AI_2 produced in phase 2 in the cell |
AI_2_Out | AI_2 exported into the environment |
Decarb_SAM | Decarboxylated S-adenosylmethionine |
DPD | 4,5-dihydroxy-2,3-pentamidine |
Homocys | homocysteine |
LuxS_gene | LuxS genes |
LuxS_mRNA | LuxS mRNA |
LuxS_prot | LuxS protein |
Met | methionine |
MTA | 5 ′-methylthioadenosine |
MTR | 5 ′-methylthioribose |
Nutrients | Nutrition source |
pfs_gene | nucleosidase Pfs genes |
Pfs_mRNA | nucleosidase Pfs mRNA |
Pfs_prot | nucleosidase Pfs protein |
Putrescine | putrescine |
SAH | S-adenosylehomocysteine |
SAM | S-adenosylmethionine |
Spermidine | Spermidine |
SRH | S-ribosyl homocysteine |