From: Real-time audio and visual display of the Coronavirus genome
Description | RNA feature | Note range | When is the feature sonified |
---|---|---|---|
As the sequence is processed each is sonified to create a constant audio stream | Nucleotide | 4 | Throughout the genome |
Di-nucleotide | 16 | Throughout the genome | |
GC Content (10Â bp) | 10 | Throughout the genome | |
GC Content (100Â bp) | 10 | Throughout the genome | |
Three of the same nucleotide repeats | Example: the poly-A tail | 4 | Anytime when condition is true |
Codons (translation only) | Codon Frame 1 | 20 | Between start and stop codons |
Codon Frame 2 | 20 | Between start and stop codons | |
Codon Frame 3 | 20 | Between start and stop codons | |
Trinucleotides (transcription only) | Only the 1st and 3rd nucleotides are considered | 16 | Throughout the genome |
Untranslated regions | Intragenic UTR regions (excluding 5′ and 3′ UTRs) | 16 | At genomic regions defined by GenBank metadata [2] Individual nucleotides were mapped to higher octaves ranges for the sake of audio clarity |
Transcription regulating sequences (TRS) | Each nucleotide in TRS1 through to TRS10 | 16 | |
Polyprotein cleavage sites (translation only) | Nucleotides that code for the cleaved AA residues | 4 | |
Stem and Loop regions (SL) | Each nucleotide in the identified region | 16 |