Fig. 1From: Visual dynamics: a WEB application for molecular dynamics simulation using GROMACSExample of a setup screen for MD of an apoprotein in VisualDynamics. Screenshot of the setup of molecular dynamics of an apoprotein contained in the file 2mu8 on VisualDynamics. The 2mu8.pdb file was uploaded and the parameters needed for execution were set. All files are available for download after the MD analysis stepBack to article page