Fig. 6
From: Sctensor detects many-to-many cell–cell interactions from single cell RNA-sequencing data
Implementation of the scTensor package. a scTensor is an R package that requires the input of both an scRNA-Seq expression matrix (SingleCellExperiment or Seurat) and a ligand–receptor (L–R) database (LRBase). The LRBase is retrieved from the AnnotationHub remote server, after which a LRBase object is created. b Using these objects, scTensor generates an HTML report file, and the results of cell–cell interaction (CCI) analysis can be visualized with a wide variety of plots