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Table 4 Representative false negative (A) and false positive (B) sentences for the first step (relation extraction to identify PK DDI sentences)

From: Deep learning-enabled natural language processing to identify directional pharmacokinetic drug–drug interactions

Sentence in Validation Dataset

True Label

Predicted Label

Reason for Wrong Prediction

A

Griseofulvin decreases the activity of warfarin-type anticoagulants so that patients receiving these drugs concomitantly may require dosage adjustment of the anticoagulant during and after griseofulvin therapy

1

0

Sentence does not contain information to be classified as PK DDI

Barbiturates usually depress griseofulvin activity and concomitant administration may require a dosage adjustment of the antifungal agent

1

0

Sentence does not contain information to be classified as PK DDI

Elimination can be accelerated by the following procedures: 1)Administer cholestyramine 8 g orally 3 times daily for 11 days

1

0

The name of the drug for the drug label is omitted from the sentence in some old drug labels

There may be competition for elimination with other compounds that are also renally eliminated

1

0

The name of the drug for the drug label is omitted from the sentence

B

The glucose lowering effect of ADMELOG may be decreased when co-administered with corticosteroids, isoniazid, niacin, estrogens, oral contraceptives, phenothiazines, danazol, diuretics, sympathomimetic agents (e.g., epinephrine, albuterol, terbutaline), somatropin, atypical antipsychotics, glucagon, protease inhibitors, and thyroid hormones

0

1

Sentence contains information to be classified as DDI, but not enough information to distinguish PK vs non-PK mechanisms

Compared to a patient with a body weight of 65 kg, the rivastigmine steady-state concentrations in a patient with a body weight of 35 kg would be approximately doubled, while for a patient with a body weight of 100 kg the concentrations would be approximately halved

0

1

Sentence contains information about an interaction between drugs and non-drug elements (body weight)

Smoking Following oral rivastigmine administration (up to 12 mg/day) with nicotine use, population pharmacokinetic analysis showed increased oral clearance of rivastigmine by 23% (n = 75 smokers and 549 nonsmokers)

0

1

Sentence contains information about an interaction between drugs and non-drug elements (smoking)

Intervention: Dose reductions and increased frequency of glucose monitoring may be required when BASAGLAR is co-administered with these drugs

0

1

Sentence contains information to be classified as DDI, but not enough information to distinguish PK vs non-PK mechanisms