Table 4 Confusion matrix of RF model on validation dataset for prediction of a) clades and b) continents
Prediction/Ref | Clade_G (%) | Clade_GH (%) | Clade_GK (%) | Clade_GR (%) | Clade_GRA (%) | Clade_GRY (%) | Clade_GV (%) |
|---|---|---|---|---|---|---|---|
(a) | |||||||
Clade_G | 61.47 | 8.11 | 0.29 | 5.79 | 0.21 | 0.46 | 4.53 |
Clade_GH | 10.47 | 80.27 | 1.40 | 7.91 | 3.00 | 0.14 | 11.33 |
Clade_GK | 2.97 | 2.33 | 96.60 | 0.85 | 5.42 | 0.03 | 0.91 |
Clade_GR | 7.31 | 3.39 | 0.79 | 71.63 | 1.15 | 1.67 | 2.42 |
Clade_GRA | 10.72 | 1.82 | 0.76 | 1.03 | 90.13 | 0.36 | 0.00 |
Clade_GRY | 1.04 | 0.44 | 0.02 | 11.23 | 0.06 | 97.34 | 0.45 |
Clade_GV | 6.01 | 3.65 | 0.15 | 1.56 | 0.02 | 0.00 | 80.36 |
Prediction/Ref | Africa (%) | Asia (%) | Europe (%) | North_America (%) | Oceania (%) | South_America (%) | Unknown (%) |
|---|---|---|---|---|---|---|---|
(b) | |||||||
Africa | 0.67 | 0.01 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 |
Asia | 0.45 | 5.29 | 0.52 | 0.46 | 1.52 | 0.25 | 1.19 |
Europe | 61.80 | 51.12 | 77.48 | 31.33 | 65.24 | 33.90 | 41.52 |
North America | 36.94 | 43.42 | 21.65 | 67.25 | 28.69 | 34.00 | 56.55 |
Oceania | 0.00 | 0.01 | 0.00 | 0.56 | 4.21 | 0.21 | 0.00 |
South America | 0.13 | 0.16 | 0.34 | 0.39 | 0.00 | 31.64 | 0.34 |
Unknown | 0.00 | 0.00 | 0.00 | 0.00 | 0.34 | 0.00 | 0.40 |