Table 2 Comparison between SCADDx and LOADDx using CTD KB
Datasets | Algorithm | Parameter values | Accuracy n@1 (%) | Accuracy n@2 (%) | Accuracy n@3 (%) | Accuracy n@4 (%) | Accuracy n@5 (%) | Accuracy n@10 (%) |
|---|---|---|---|---|---|---|---|---|
Dataset 1 Testset 1a (GSE73072) | SCADDx | P = 200 Q = 200 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 |
LOADDx | P = 200 Q = 200 | 69.23 | 69.23 | 69.23 | 69.23 | 69.23 | 69.23 | |
Dataset 1 Testset 1b (GSE73072) | SCADDx | P = 200 Q = 200 | 84.62 | 84.62 | 84.62 | 84.62 | 84.62 | 76.92 |
LOADDx | P = 200 Q = 200 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 | |
Dataset 2 Testset 2a (GSE68310) | SCADDx | P = 200 Q = 200 | 100 | 100 | 100 | 100 | 100 | 100 |
LOADDx | P = 200 Q = 200 | 75 | 75 | 87.5 | 87.5 | 87.5 | 100 | |
Dataset 2 Testset 2b (GSE68310) | SCADDx | P = 200 Q = 200 | 86.66 | 86.66 | 86.66 | 86.66 | 86.66 | 93.33 |
LOADDx | P = 200 Q = 200 | 86.66 | 86.66 | 86.66 | 86.66 | 86.66 | 86.66 | |
Dataset 3 (GSE90732) | SCADDx | P = 200 Q = 200 | 100 | 100 | 100 | 100 | 100 | 100 |
LOADDx | P = 200 Q = 200 | 100 | 100 | 100 | 100 | 100 | 100 | |
Dataset 4 (GSE61754) | SCADDx | P = 200 Q = 200 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 |
LOADDx | P = 200 Q = 200 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 |