Table 3 Comparison between SCADDx and LOADDx using CTD KB considering best parameter values (P & Q) for all the four datasets
Datasets | Algorithm | Parameter values | Accuracy n@1 (%) | Accuracy n@2 (%) | Accuracy n@3 (%) | Accuracy n@4 (%) | Accuracy n@5 (%) | Accuracy n@10 (%) |
|---|---|---|---|---|---|---|---|---|
Dataset 1 Testset 1a (GSE73072) | SCADDx | P = 100 Q = 175 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 | 84.62 |
LOADDx | P = 25 Q = 225 | 69.23 | 69.23 | 69.23 | 69.23 | 69.23 | 69.23 | |
Dataset 1 Testset 1b (GSE73072) | SCADDx | P = 100 Q = 175 | 84.62 | 76.92 | 76.92 | 76.92 | 76.92 | 76.92 |
LOADDx | P = 25 Q = 225 | 84.62 | 84.62 | 84.62 | 84.62 | 84.62 | 84.62 | |
Dataset 2 Testset 2a (GSE68310) | SCADDx | P = 150 Q = 300 | 100 | 100 | 100 | 100 | 100 | 100 |
LOADDx | P = 50 Q = 300 | 75 | 81.25 | 87.5 | 87.5 | 93.75 | 100 | |
Dataset 2 Testset 2b (GSE68310) | SCADDx | P = 150 Q = 300 | 86.66 | 93.33 | 93.33 | 93.33 | 93.33 | 100 |
LOADDx | P = 50 Q = 300 | 80 | 80 | 80 | 80 | 80 | 86.66 | |
Dataset 3 (GSE90732) | SCADDx | P = 25 Q = 25 | 100 | 100 | 100 | 100 | 100 | 100 |
LOADDx | P = 25 Q = 25 | 75 | 100 | 100 | 100 | 100 | 100 | |
Dataset 4 (GSE61754) | SCADDx | P = 25 Q = 25 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 |
LOADDx | P = 25 Q = 50 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 | 85.71 |