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Table 1 Information on each BAliBASE reference used

From: Protein embedding based alignment

 

RV11

RV12

RV911

RV912

RV913

# of MSA’s

38

44

29

27

27

# of PWA’s

943

2335

5816

1038

2312

Avg # of Seq

7

9

15

8

10

Avg Seq Length

309

387

702

462

501

  1. # of MSA’s: the number of multiple sequence alignments in each reference. # of PWA’s: the total number of pairwise alignments that were extracted from each MSA. Avg Seq: the average number of sequences in each MSA. Avg Seq Length: the average sequence length for all sequences found in each reference
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BMC Bioinformatics

ISSN: 1471-2105

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