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Table 5 Average SP scores for PEbA/BLOSUM for each alignment length range

From: Protein embedding based alignment

 

0-499

500-999

1000-1499

1500-1999

2000-2499

RV11

0.59\(^a\)/0.22\(^b\)

0.57/0.22

–\(^c\)

–

–

RV12

0.87/0.65

0.80/0.58

0.75/0.59

–

–

RV911

0.58/0.34

0.47/0.29

0.45/0.27

0.40/0.24

0.38/0.22

RV912

0.75/0.61

0.76/0.59

0.67/0.55

–

–

RV913

0.90/0.83

0.95/0.89

0.87/0.79

–

–

  1. \(^a\): PEbA; \(^b\): BLOSUM62; \(^c\): data not shown when there are fewer than 10 pairwise alignments within that range of alignment length
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BMC Bioinformatics

ISSN: 1471-2105

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