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Fig. 1 | BMC Bioinformatics

Fig. 1

From: CNCA aligns small annotated genomes

Fig. 1

CNCA pipeline and example of use of CNCA with coronavirus sequences. A CNCA pipeline diagram. B Part of the alignment generated by CNCA for SARS-CoV-2 and 11 closely-related virus genomes. Virus names are indicated on the left. Wuhan-Hu-1 is SARS-CoV-2. _nt means nucleotide sequence, and _aa protein sequence. The region comprises the end of the ORF1ab coding region and the beginning of the Spike coding region (top boxes). Positions on the MSAnt CNCA alignment are indicated. C Corresponding nucleotide sequences aligned with MAFFT

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BMC Bioinformatics

ISSN: 1471-2105

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