Table 7 Comparison of StackDPP with state-of-the-art methods using independent testing on the UNIPROT356 dataset
From: StackDPP: a stacking ensemble based DNA-binding protein prediction model
Model | ACC | SN | SP | MCC | PREC | F1 | AUROC | AUPR |
|---|---|---|---|---|---|---|---|---|
DPP-PsseAAC | 0.83 | 0.81 | 0.85 | 0.67 | 0.85 | 0.83 | 0.83 | 0.87 |
Local-DPP | 0.88 | 0.87 | 0.89 | 0.76 | 0.89 | 0.88 | 0.88 | 0.95 |
Adelina (Group) | 0.84 | 0.80 | 0.88 | 0.68 | 0.87 | 0.83 | 0.84 | 0.92 |
Adelina (RFE) | 0.85 | 0.85 | 0.86 | 0.71 | 0.86 | 0.85 | 0.85 | 0.92 |
iDNAProt-ES | 0.90 | 0.90 | 0.89 | 0.80 | 0.89 | 0.90 | 0.90 | 0.96 |
StackDPP | 0.93 | 0.90 | 0.96 | 0.86 | 0.95 | 0.92 | 0.93 | 0.97 |