BMC Bioinformatics

Table 3 Classification results for the four subtypes TCGA to ACES

From: Few-shot genes selection: subset of PAM50 genes for breast cancer subtypes classification

	Basal					Her2
	Acc	Prec	Rec	F1	AUC	Acc	Prec	Rec	F1	AUC
PAM50	0.930	0.966	0.944	0.955	0.999	0.930	0.845	0.860	0.852	0.992
Subset 36	0.927	0.946	0.978	0.961	0.999	0.927	0.855	0.825	0.839	0.992
Subset 35	0.943	0.935	0.978	0.956	0.999	0.943	0.852	0.807	0.829	0.991
Subset 34	0.927	0.955	0.955	0.955	0.999	0.927	0.882	0.789	0.833	0.992

	LumA					LumB
	Acc	Prec	Rec	F1	AUC	Acc	Prec	Rec	F1	AUC
PAM50	0.930	0.955	0.966	0.960	0.997	0.930	0.908	0.902	0.905	0.990
Subset 36	0.927	0.954	0.949	0.952	0.997	0.927	0.909	0.909	0.909	0.992
Subset 35	0.943	0.967	0.989	0.978	0.998	0.943	0.953	0.917	0.934	0.991
Subset 34	0.927	0.944	0.960	0.952	0.996	0.927	0.904	0.924	0.914	0.991

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ISSN: 1471-2105

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