BMC Bioinformatics

Table 4 Classification results for the four subtypes ACES to TCGA

From: Few-shot genes selection: subset of PAM50 genes for breast cancer subtypes classification

	Basal					Her2
	Acc	Prec	Rec	F1	AUC	Acc	Prec	Rec	F1	AUC
PAM50	0.910	1.000	0.931	0.964	1.000	0.910	0.850	1.000	0.919	0.999
Subset 37	0.910	1.000	0.897	0.945	0.999	0.910	0.842	0.941	0.889	0.996
Subset 36	0.935	1.000	0.931	0.964	1.000	0.935	0.850	1.000	0.919	0.996
Subset 32	0.923	1.000	0.931	0.964	0.999	0.923	0.895	1.000	0.944	0.997

	LumA					LumB
	Acc	Prec	Rec	F1	AUC	Acc	Prec	Rec	F1	AUC
PAM50	0.910	0.914	0.914	0.914	0.988	0.910	0.868	0.846	0.857	0.978
Subset 37	0.910	0.915	0.929	0.922	0.990	0.910	0.872	0.872	0.872	0.985
Subset 36	0.935	0.944	0.957	0.950	0.992	0.935	0.919	0.872	0.895	0.988
Subset 32	0.923	0.929	0.929	0.929	0.989	0.923	0.872	0.872	0.872	0.986

Back to article page

ISSN: 1471-2105

Contact us

General enquiries: journalsubmissions@springernature.com