Fig. 3
From: NanoBERTa-ASP: predicting nanobody paratope based on a pretrained RoBERTa model
NanoBERTa-ASP accurately predicts the binding sites of nanobodies. A Annotated paratope positions from the crystal structures via Biopython, PDB id:5f7y; B Prediction of PDB id:5f7y binding sites by NanoBERTa-ASP; C Annotated paratope positions from the crystal structures via Biopython, PDB id:2wzp; D Prediction of PDB id:2wzp binding sites by NanoBERTa-ASP. Binding sites calculated by NanoBERTa-ASP are represented by green letters, and binding sites calculated by Biopython are represented by blue letters