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Table 5 Comparative analysis between algorithms in various distance and correlation metrics

From: biomapp::chip: large-scale motif analysis

metrics

program

mean

sd

min

max

 

Biomapp

0.993

0.031

0.787

1.000

bha

Homer

0.963

0.045

0.746

0.999

Meme

0.972

0.040

0.751

0.999

Prosampler

0.988

0.037

0.685

1.000

 

Biomapp

0.026

0.058

0.002

0.412

euc

Homer

0.115

0.085

0.016

0.391

Meme

0.091

0.071

0.019

0.429

Prosampler

0.045

0.065

0.008

0.460

 

Biomapp

0.033

0.063

0.003

0.393

hell

Homer

0.143

0.091

0.026

0.443

Meme

0.129

0.077

0.027

0.470

Prosampler

0.067

0.069

0.011

0.479

 

Biomapp

0.061

0.137

0.005

0.935

man

Homer

0.264

0.194

0.039

0.925

Meme

0.218

0.167

0.044

1.016

Prosampler

0.104

0.147

0.019

1.008

 

Biomapp

0.991

0.045

0.626

1.000

pcc

Homer

0.955

0.059

0.663

0.999

Meme

0.983

0.055

0.686

1.000

Prosampler

0.985

0.054

0.600

1.000

 

Biomapp

1.988

0.057

1.554

2.000

sw

Homer

1.940

0.079

1.561

1.999

Meme

1.969

0.070

1.586

1.999

Prosampler

1.982

0.074

1.391

2.000

  1. The bold highlights the winner of each metric in terms of average