Tool | Scope | Computing environment | User interface features | Hardware acceleration |
---|---|---|---|---|
Sequana | DNA-seq/RNA-seq | Local | Pipeline creation | N/A |
DNAScan | DNA-seq | Local | Pipeline creation | N/A |
Sarek | DNA-seq/RNA-seq | Cloud/Local | Pipeline creation | N/A |
Galaxy | Extensive from genomics to metagenomics | Cloud/Local | Pipeline creation and extensive analysis on output data | N/A |
Terra Bio | DNA-seq/RNA-seq | Cloud | Pipeline creation and extensive analysis on output data | GPU Acceleration via Clara Parabricks |
Cosap | DNA-seq | Cloud/Local | Pipeline creation and detailed inspection of results and reports | GPU Acceleration via Clara Parabricks |