Fig. 3
From: The effect of data transformation on low-dimensional integration of single-cell RNA-seq
Visualization results for the Tabula Muris dataset. UMAP and DBSCAN were used for this analysis. ’RAW’ indicates the original read count data of TM. ’Best’ represents the best result out of 16 data transformation methods. The cell types and batch IDs are represented with different colors in each plot. The entire results and all plots are available in a Additional file 1