Volume 9 Supplement 5

Proceedings of the 10th Bio-Ontologies Special Interest Group Workshop 2007. Ten years past and looking to the future

Proceedings

Edited by Phillip Lord, Robert Stevens, Susanna-Assunta Sansone, Robin MacEntire

10th Bio-Ontologies Special Interest Group Workshop 2007. Ten years past and looking to the future.

Vienna, Austria

20 July 2007

  1. Proceedings

    Gene Ontology annotations: what they mean and where they come from

    To address the challenges of information integration and retrieval, the computational genomics community increasingly has come to rely on the methodology of creating annotations of scientific literature using ...

    David P Hill, Barry Smith, Monica S McAndrews-Hill and Judith A Blake

    BMC Bioinformatics 2008 9(Suppl 5):S2

    Published on: 29 April 2008

  2. Proceedings

    Mapping proteins to disease terminologies: from UniProt to MeSH

    Although the UniProt KnowledgeBase is not a medical-oriented database, it contains information on more than 2,000 human proteins involved in pathologies. However, these annotations are not standardized, which ...

    Anaïs Mottaz, Yum L Yip, Patrick Ruch and Anne-Lise Veuthey

    BMC Bioinformatics 2008 9(Suppl 5):S3

    Published on: 29 April 2008

  3. Proceedings

    Metrics for GO based protein semantic similarity: a systematic evaluation

    Several semantic similarity measures have been applied to gene products annotated with Gene Ontology terms, providing a basis for their functional comparison. However, it is still unclear which is the best app...

    Catia Pesquita, Daniel Faria, Hugo Bastos, António EN Ferreira, André O Falcão and Francisco M Couto

    BMC Bioinformatics 2008 9(Suppl 5):S4

    Published on: 29 April 2008

  4. Proceedings

    Facilitating the development of controlled vocabularies for metabolomics technologies with text mining

    Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public resources. Experimental data sets from meta...

    Irena Spasić, Daniel Schober, Susanna-Assunta Sansone, Dietrich Rebholz-Schuhmann, Douglas B Kell and Norman W Paton

    BMC Bioinformatics 2008 9(Suppl 5):S5

    Published on: 29 April 2008