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Table 4 Top 10 pathway pairs showing significant difference of Z-transformed interaction scores in the DMD data.

From: Identifying set-wise differential co-expression in gene expression microarray data

Pathway Pair

# of OGs

IS

dZIS

  

NM

DMD

 

Hs_beta-arrestins in GPCR Desensitization (15)

D4-GDI Signaling Pathway (22)

0

0.95

-0.71

14.7

D4-GDI Signaling Pathway (22)

Role of arrestins in the activation and targeting of MAP kinases (22)

0

0.94

-0.65

13.2

Eicosanoid Metabolism (25)

Lysine_degradation (28)

0

0.94

-0.66

13.2

Regulation of hematopoiesis by cytokines (28)

Monoamine_GPCRs (34)

0

0.92

-0.66

12.6

Aspirin Blocks Signaling Pathway Involved in Platelet Activation (35)

D4-GDI Signaling Pathway (22)

0

0.90

-0.68

12.3

D4-GDI Signaling Pathway (22)

RB Tumor Suppressor/Checkpoint Signaling in response to DNA damage (23)

0

0.79

-0.80

11.5

T Helper Cell Surface Molecules (16)

TGF beta signaling pathway (34)

0

0.88

-0.64

11.4

D4-GDI Signaling Pathway (22)

Trka Receptor Signaling Pathway (22)

0

0.84

-0.68

11.0

Aspirin Blocks Signaling Pathway Involved in Platelet Activation (35)

Msp/Ron Receptor Signaling Pathway (14)

0

0.81

-0.72

10.8

Msp/Ron Receptor Signaling Pathway (14)

Roles of arrestin-dependent Recruitment of Src Kinases in GPCR Signaling (28)

0

0.79

-0.72

10.5

  1. # of OGs: number of overlapping genes in two gene sets, NM: normal muscle, DMD: Duchenne's muscular dystrophy, dZIS: difference of Z-transformed IS, (): number of genes in a gene set, Nonparametric p value < 8.0E-7.