BMC Bioinformatics

Collections open to submissions

Prediction and modelling of RNA structure and interactions

Guest edited by Anže Božič, Letizia Chiodo and Luca Tesei

Evolutionary studies

Guest edited by Shibiao Wan

Functional annotation and pathway analysis

Guest edited by Giuseppe Agapito

Mass spectrometry-based proteomics: advances in data processing

Guest edited by Andreas Hildebrandt

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Editor's Picks

RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy

New Content Item Tidyproteomics: an open-source R package and data object for quantitative proteomics post analysis and visualization

HostNet: improved sequence representation in deep neural networks for virus-host prediction

Authors: Zhaoyan Ming, Xiangjun Chen, Shunlong Wang, Hong Liu, Zhiming Yuan, Minghui Wu and Han Xia

Content type: Research 1 December 2023
PMFFRC: a large-scale genomic short reads compression optimizer via memory modeling and redundant clustering

Authors: Hui Sun, Yingfeng Zheng, Haonan Xie, Huidong Ma, Xiaoguang Liu and Gang Wang

Content type: Software 30 November 2023
Completing a genomic characterisation of microscopic tumour samples with copy number

Authors: Joel Nulsen, Nosheen Hussain, Aws Al-Deka, Jason Yap, Khalil Uddin, Christopher Yau and Ahmed Ashour Ahmed

Content type: Software 30 November 2023
A seed expansion-based method to identify essential proteins by integrating protein–protein interaction sub-networks and multiple biological characteristics

Authors: He Zhao, Guixia Liu and Xintian Cao

Content type: Research 30 November 2023
Biocaiv: an integrative webserver for motif-based clustering analysis and interactive visualization of biological networks

Authors: Dong-Xu Li, Peng Zhou, Bo-Wei Zhao, Xiao-Rui Su, Guo-Dong Li, Jun Zhang, Peng-Wei Hu and Lun Hu

Content type: Software 29 November 2023

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QMachine: commodity supercomputing in web browsers

Authors: Sean R Wilkinson and Jonas S Almeida

Content type: Research article 9 June 2014
WGCNA: an R package for weighted correlation network analysis

Authors: Peter Langfelder and Steve Horvath

Content type: Software 29 December 2008
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Authors: Bo Li and Colin N Dewey

Content type: Software 4 August 2011

The Related Article to this article has been published in Nature Protocols 2013 8:nprot.2013.084
Statistical analysis of real-time PCR data

Authors: Joshua S Yuan, Ann Reed, Feng Chen and C Neal Stewart Jr

Content type: Methodology article 22 February 2006
Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

Authors: Jian Ye, George Coulouris, Irena Zaretskaya, Ioana Cutcutache, Steve Rozen and Thomas L Madden

Content type: Software 18 June 2012

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Aims and scope

BMC Bioinformatics is an open access, peer-reviewed journal that considers articles describing novel computational algorithms and software, models and tools, including statistical methods, machine learning and artificial intelligence, as well as systems biology.

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BMC Bioinformatics

Collections open to submissions

Prediction and modelling of RNA structure and interactions

Evolutionary studies

Functional annotation and pathway analysis

Mass spectrometry-based proteomics: advances in data processing

Editor's Picks

Articles

HostNet: improved sequence representation in deep neural networks for virus-host prediction

PMFFRC: a large-scale genomic short reads compression optimizer via memory modeling and redundant clustering

Completing a genomic characterisation of microscopic tumour samples with copy number

A seed expansion-based method to identify essential proteins by integrating protein–protein interaction sub-networks and multiple biological characteristics

Biocaiv: an integrative webserver for motif-based clustering analysis and interactive visualization of biological networks

QMachine: commodity supercomputing in web browsers

WGCNA: an R package for weighted correlation network analysis

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Statistical analysis of real-time PCR data

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

Aims and scope

Become an Editorial Board Member

Featured blog

Spotlight On

Climate Change

BMC Series Blog

BMC Environmental Science is now open for submissions!

Exciting news: BMC Methods now open for submissions!

World AIDS Day 2023: Highlights from the BMC Series

Latest Tweets

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