BMC Bioinformatics

Announcing In Review - now available in BMC Bioinformatics

BMC Bioinformatics, in partnership with Research Square, is launching In Review. This new option provides authors with on-demand information on the status of their manuscript, enables them to share their work with funders and their research community, and allows their colleagues to comment and collaborate - all whilst their manuscript is under review.

Pixabay

Announcement: New Sequence Analysis Section

The sections "Sequence Analysis (methods)" and "Sequence Analysis (applications)" in BMC Bioinformatics have been merged into one new section! Read our blog post to find out more.

Pixabay

Call for papers: Machine Learning and Artificial Intelligence in Bioinformatics

BMC Bioinformatics are excited to announce the launch of a new section, "Machine Learning and Artificial Intelligence in Bioinformatics" lead by Section Editor Professor Jean-Philippe Vert.

To celebrate this, we are also launching a new thematic series "Machine learning for computational and systems biology".

Pixabay

Call for papers: Computational Analysis of Biological Images

BMC Bioinformatics are also excited to announce the launch of the sections “Imaging and Image analysis” and “Data Visualization” sections, replacing our “Imaging, image analysis and data visualization” section.

To celebrate this, we are launching the series "Computational analysis of biological Images", lead by Guest Editor Professor Ge Yang.

Content type: Research
| 18 April 2019

Integration of transcriptomic data in a genome-scale metabolic model to investigate the link between obesity and breast cancer

Authors: Ilaria Granata, Enrico Troiano, Mara Sangiovanni and Mario Rosario Guarracino
Content type: Software
| 18 April 2019

VIGLA-M: visual gene expression data analytics

Authors: Ismael Navas-Delgado, José García-Nieto, Esteban López-Camacho, Maciej Rybinski, Rocio Lavado, Miguel Ángel Berciano Guerrero and José F. Aldana-Montes
Content type: Research
| 18 April 2019

Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics

Authors: Umberto Ferraro Petrillo, Mara Sorella, Giuseppe Cattaneo, Raffaele Giancarlo and Simona E. Rombo
Content type: Software
| 18 April 2019

FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing

Authors: Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo and Adolfo Saiardi
Content type: Research
| 18 April 2019

Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer

Authors: Alexander Kel, Ulyana Boyarskikh, Philip Stegmaier, Leonid S. Leskov, Andrey V. Sokolov, Ivan Yevshin, Nikita Mandrik, Daria Stelmashenko, Jeannette Koschmann, Olga Kel-Margoulis, Mathias Krull, Anna Martínez-Cardús, Sebastian Moran, Manel Esteller, Fedor Kolpakov, Maxim Filipenko…

Most recent articles RSS

View all articles

Content type: Research article
| 9 June 2014

QMachine: commodity supercomputing in web browsers

Authors: Sean R Wilkinson and Jonas S Almeida
Content type: Software
| 4 August 2011

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Authors: Bo Li and Colin N Dewey
Content type: Software
| 29 December 2008

WGCNA: an R package for weighted correlation network analysis

Authors: Peter Langfelder and Steve Horvath
Content type: Research article
| 9 March 2013

A comparison of methods for differential expression analysis of RNA-seq data

Authors: Charlotte Soneson and Mauro Delorenzi
Content type: Research article
| 17 November 2006

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data

Authors: Jonathan G Lees, Andrew J Miles, Robert W Janes and B A Wallace

Most accessed articles RSS

View all articles

Aims and scope

BMC Bioinformatics is an open access, peer-reviewed journal that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling and analysis of all kinds of biological data, as well as other areas of computational biology.

Editor

Alison Cuff, BioMed Central

Section Editors

Lukasz Kurgan, Virginia Commonwealth University
João Setubal, Universidade de São Paulo
Jens Stoye, Universität Bielefeld
Karin Verspoor, The University of Melbourne
Jean-Philippe Vert, Mines ParisTech

Journal Sections

Analysis and modelling of complex systems
Comparative genomics
Data visualization
Imaging, and image analysis
Knowledge-based analysis
Networks analysis
Novel computational methods for the analysis of biological systems
Proteomics
Sequence analysis
Structural analysis
Transcriptome analysis

Lukasz Kurgan, Section Editor

Structural analysis

BMC Series Editorial Site

The BMC Series Editorial site serves as a home for editorial board resources and as an online community, facilitating interaction and networking between the editorial board and the BMC series in-house team.

BMC Series blog

The importance of negative results for family medicine

12 April 2019
BMC Geriatrics – Highlights of 2018

10 April 2019
Should I, or should I not? The ‘tricky business’ about healthcare decision making

09 April 2019

Latest Tweets

BMC Bioinformatics

Announcing In Review - now available in BMC Bioinformatics

Announcement: New Sequence Analysis Section

Call for papers: Machine Learning and Artificial Intelligence in Bioinformatics

Call for papers: Computational Analysis of Biological Images

Articles

Integration of transcriptomic data in a genome-scale metabolic model to investigate the link between obesity and breast cancer

VIGLA-M: visual gene expression data analytics

Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics

FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing

Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer

QMachine: commodity supercomputing in web browsers

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

WGCNA: an R package for weighted correlation network analysis

A comparison of methods for differential expression analysis of RNA-seq data

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data

Aims and scope

Editor

Section Editors

Journal Sections

Lukasz Kurgan, Section Editor

Structural analysis

BMC Series Editorial Site

BMC Series blog

The importance of negative results for family medicine

BMC Geriatrics – Highlights of 2018

Should I, or should I not? The ‘tricky business’ about healthcare decision making

Latest Tweets

Follow

2017 Journal Metrics

BMC Bioinformatics

Contact us