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Featured blog: A Year in Bioinformatics

As we begin a fresh new year, the inhouse editors of BMC Bioinformatics look back over some of the fascinating articles published in 2017.

Content type: Methodology article
| 20 August 2018

Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

Authors: Costa Bachas, Jasmina Hodzic, Johannes C. van der Mijn, Chantal Stoepker, Henk M. W. Verheul, Rob M. F. Wolthuis, Emanuela Felley-Bosco, Wessel N. van Wieringen, Victor W. van Beusechem, Ruud H. Brakenhoff and Renée X. de Menezes
Content type: Methodology article
| 20 August 2018

Clustering of circular consensus sequences: accurate error correction and assembly of single molecule real-time reads from multiplexed amplicon libraries

Authors: Felix Francis, Michael D. Dumas, Scott B. Davis and Randall J. Wisser
Content type: Software
| 14 August 2018

BALCONY: an R package for MSA and functional compartments of protein variability analysis

Authors: Alicja Płuciennik, Michał Stolarczyk, Maria Bzówka, Agata Raczyńska, Tomasz Magdziarz and Artur Góra
Content type: Software
| 10 August 2018

REHUNT: a reliable and open source package for restriction enzyme hunting

Authors: Yu-Huei Cheng, Jiun-Jian Liaw and Che-Nan Kuo
Content type: Software
| 10 August 2018

miREM: an expectation-maximization approach for prioritizing miRNAs associated with gene-set

Authors: Luqman Hakim Abdul Hadi, Quy Xiao Xuan Lin, Tri Tran Minh, Marie Loh, Hong Kiat Ng, Agus Salim, Richie Soong and Touati Benoukraf

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Content type: Research article
| 9 June 2014

QMachine: commodity supercomputing in web browsers

Authors: Sean R Wilkinson and Jonas S Almeida
Content type: Software
| 4 August 2011

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Authors: Bo Li and Colin N Dewey
Content type: Software
| 29 December 2008

WGCNA: an R package for weighted correlation network analysis

Authors: Peter Langfelder and Steve Horvath
Content type: Research article
| 9 March 2013

A comparison of methods for differential expression analysis of RNA-seq data

Authors: Charlotte Soneson and Mauro Delorenzi
Content type: Research article
| 17 November 2006

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data

Authors: Jonathan G Lees, Andrew J Miles, Robert W Janes and B A Wallace

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Aims and scope

BMC Bioinformatics is an open access, peer-reviewed journal that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling and analysis of all kinds of biological data, as well as other areas of computational biology.

Editor

Alison Cuff, BioMed Central

Section Editors

John S Garavelli, University of Delaware
Lukasz Kurgan, Virginia Commonwealth University
Adam Olshen, University of California, San Francisco
Hanchuan Peng, Allen Institute for Brain Science
Graziano Pesole, University of Bari
Olivier Poch, ICube Laboratory, Strasbourg
João Setubal, Universidade de São Paulo
Hagit Shatkay, University of Delaware
Jean-Philippe Vert, Mines ParisTech

Lukasz Kurgan, Section Editor

Structural analysis

BMC Series blog

Not too much and not too little: the right amount of social network site use may reduce loneliness among mothers of young children

16 August 2018
Longer hours on social media may increase teens’ risk of cyberbullying

14 August 2018
Can social attachment contribute to problematic Facebook use?

10 August 2018

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Get credit for your data

Featured blog: A Year in Bioinformatics

Articles

Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

Clustering of circular consensus sequences: accurate error correction and assembly of single molecule real-time reads from multiplexed amplicon libraries

BALCONY: an R package for MSA and functional compartments of protein variability analysis

REHUNT: a reliable and open source package for restriction enzyme hunting

miREM: an expectation-maximization approach for prioritizing miRNAs associated with gene-set

QMachine: commodity supercomputing in web browsers

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

WGCNA: an R package for weighted correlation network analysis

A comparison of methods for differential expression analysis of RNA-seq data

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data

Aims and scope

Editor

Section Editors

Lukasz Kurgan, Section Editor

Structural analysis

BMC Series blog

Not too much and not too little: the right amount of social network site use may reduce loneliness among mothers of young children

Longer hours on social media may increase teens’ risk of cyberbullying

Can social attachment contribute to problematic Facebook use?

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2017 Journal Metrics

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