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Table 3 CGI profiles: Methylation values of each non-redundant CGI profile.

From: Profile analysis and prediction of tissue-specific CpG island methylation classes

  Constitutively methylated Unmethylated in sperm Differentially methylated Constitutively unmethylated
Tissue/Cell type 1 2 3 4 5 6 7 8 9
CD4 0.916 0.881 0.655 0.074 0.078 0.065 0.076 0.094 0.072
CD8 0.912 0.905 0.683 0.089 0.078 0.071 0.104 0.136 0.092
DF 0.876 0.758 0.595 0.070 0.066 0.068 0.079 0.082 0.045
DK 0.866 0.708 0.531 0.077 0.061 0.063 0.072 0.074 0.086
DM 0.900 0.854 0.734 0.093 0.103 0.079 0.102 0.133 0.108
FL 0.842 0.762 0.562 0.104 0.117 0.105 0.138 0.158 0.157
FSM 0.842 0.793 0.619 0.097 0.136 0.127 0.125 0.118 0.052
HM 0.913 0.867 0.688 0.068 0.071 0.059 0.064 0.072 0.059
Liver 0.900 0.883 0.691 0.073 0.071 0.065 0.080 0.095 0.077
Placenta 0.878 0.846 0.679 0.085 0.075 0.066 0.096 0.098 0.123
SM 0.866 0.804 0.558 0.071 0.072 0.057 0.062 0.078 0.067
Sperm 0.836 0.178 0.359 0.102 0.086 0.105 0.125 0.117 0.112
Average methylation ± Std 0.879 ± 0.065 0.770 ± 0.1 0.613 ± 0.202 0.084 ± 0.066 0.085 ± 0.068 0.078 ± 0.058 0.094 ± 0.074 0.105 ± 0.088 0.088 ± 0.065
  1. Average and tissue-specific methylation values of the nine non-redundant CGI profiles. The methylation values mentioned during the comparison of the profiles are marked in bold and all differences between profiles are supported by a MWW p-value lower than 0.01.
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