Table 1 Technologies and data formats supported by MIMAS 3.0.
From: MIMAS 3.0 is a Multiomics Information Management and Annotation System
Technology | Raw data format | Processed data format |
|---|---|---|
Affymetrix GeneChips | Affymetrix CEL file (GCOS versions 3 or 4 or CCG version 1) | Tabular (Affymetrix MAS/GCOS versions 4 or 5, GEO MAS, GEO Series Matrix) |
Affymetrix All-Exon Arrays | Â | Â |
Affymetrix Tiling Arrays | Â | Â |
Affymetrix Promoter arrays | Â | Â |
Affymetrix SNP arrays | Â | Â |
Affymetrix Gene Arrays | Â | Â |
Illumina BeadArrays | Tabular (Illumina BeadStudio ArrayExpress-format output plug-in) | |
Illumina miRNA arrays | Â | Â |
Illumina Genome Analyzer | Â | GFF 3 |