Representative transcript sets for evaluating a translational initiation sites predictor

BMC Bioinformatics

Table 7 A summary of the data on average negative hydrophobicity

		Below -4		[-4, -3)		[-3, -2)		[-2, -1)		[-1, 0)
		PR	LR	PR	LR	PR	LR	PR	LR	PR	LR
H. sap.	I	0%	0%	0%	0%	0%	0%	*65%*	0%	35%	0%
	II	0%	0%	0%	0%	0%	0%	*56%*	72%	42%	62%
	III	0%	0%	0%	0%	0%	0%	*56%*	91%	42%	88%
M. mus.	I	0%	0%	0%	0%	0%	0%	*63%*	0%	37%	0%
	II	0%	0%	0%	0%	0%	0%	*56%*	71%	43%	62%
	III	0%	0%	0%	0%	0%	0%	*56%*	89%	43%	86%
C. ele.	I	0%	0%	0%	0%	0%	0%	*62%*	0%	38%	0%
	II	0%	0%	0%	0%	0%	0%	*56%*	70%	43%	62%
	III	0%	0%	0%	0%	0%	0%	*61%*	94%	39%	94%
D. mel.	I	0%	0%	0%	0%	0%	0%	*69%*	0%	31%	0%
	II	0%	0%	0%	0%	0%	0%	*59%*	74%	41%	61%
	III	0%	0%	0%	0%	0%	0%	*62%*	92%	38%	89%

This parameter is yielded by averaging over all the hydrophobicity values that are less than 0 within one plot.

ISSN: 1471-2105