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Table 10 Relationship amongst detected transcripts and unique genes

From: Identification of novel DNA repair proteins via primary sequence, secondary structure, and homology

Methodology Threshold No. Transcripts No. Unique Genes % Unique Genes
P 0.001 3330 2851 85.6%
  0.151 555 461 83.1%
PS 0.001 67393 56145 83.3%
  0.670 4144 3603 86.9%
PH 0.001 4403 3558 80.8%
  1.015 796 689 86.6%
BLAST 10-3 4302 3492 81.1%
  10-9 1419 1123 79.1%
Average Percentage of Unique Genes 83.3%
Standard Deviation 2.9%
  1. The total number of detected protein transcripts and total number of resulting unique genes is given for each method using two thresholds derived from GO-PDB identification experiments. The average of 83.3% is in close agreement with findings in [7].