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Table 14 Web Server Accuracy

From: Identification of novel DNA repair proteins via primary sequence, secondary structure, and homology

Methodology Threshold True Positive Rate False Positive Rate
P-3 0.001 64.6% 0.1%
  0.151 57.3% 0
PS-3–9 0.001 72.3% 2.4%
  0.670 53.1% 0
PH-3 0.001 65.0% 1.7%
  1.1015 7.9% 0
PSH-3–8 0.001 61.6% 1.7%
  0.727 39.5% 0
BLAST 10-3 63.4% 1.7%
  10-9 60.1% 0.7%
  1. Metrics for interpreting the results produced by the INTREPED web server. For each of the five methods INTREPED employs, thresholds necessary for basic decision making and maximum TPR-0 rates are given. Each method and threshold pair provides the true positive and false positive rate based on identification experiments.