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Table 1 Data sets used in our experiments. The breast cancer data set is annotated by gene symbols.

From: Comparative study of gene set enrichment methods

Dataset

Study

Class I vs Class II

# Probes

Myc

[10]

10 vs 10

54675

Ras

[10]

10 vs 10

54675

E2F3

[10]

9 vs 10

54675

Src

[10]

7 vs 10

54675

β-catenin

[10]

9 vs 10

54675

P53

NCI-60

12 vs 50

12625

Hypoxia

[13]

6 vs 6

54675

Breast

[11]

28 vs 32

15017

Lung

[12]

45 vs 48

54675

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BMC Bioinformatics

ISSN: 1471-2105

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