Skip to main content

Table 7 Experimental results on the improved eukaryotic benchmark.

From: Discovering multiple realistic TFBS motifs based on a generalized model

Algorithms Markov Real
  nSn nPPV nPC nCC nSn nPPV nPC nCC
GALF-G 0.117 0.184 0.102 0.138 0.116 0.156 0.095 0.126
MEME 0.115 0.107 0.077 0.097 0.103 0.092 0.063 0.083
Weeder 0.133 0.043 0.032 0.052 0.202 0.071 0.055 0.096
  1. Average performances (nSn, nPPV, nPC and nCC) of GALF-G, MEME and Weeder on the algorithm benchmark suite (50 datasets with Markov backgrounds and 50 with real backgrounds).