Skip to main content

Table 9 Statistics on the E. Coli benchmark.

From: Discovering multiple realistic TFBS motifs based on a generalized model

Algorithms

Best

Worst

Mean

STD

Top-scored

GALF-G (15)

0.260

0.094

0.121

0.031

0.169

GALF-G (rg)

0.254

0.080

0.129

0.040

0.177

AlignACE

0.128

0.029

0.072

0.045

0.083

BioProspector

0.174

0.097

0.124

0.041

0.130

MDScan

0.149

0.068

0.106

0.034

0.099

MEME

0.158

0.002

0.054

0.069

0.116

MotifSampler

0.153

0.010

0.062

0.065

0.069

Weeder

0.152

0.031

0.081

0.106

0.064

  1. The statistics of the top 5 predictions in terms of nPC on the ECRDB62A benchmark. GALF-G (15) is run with the fixed width 15 and GALF-G (rg) is run with the range [10,20]. STD is the standard deviation. The best mean and top-scored results are bold.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us