Table 4 Distribution of BLAST best-hit and sequence-signature based methods for prediction of HGT events.
From: Stratification of co-evolving genomic groups using ranked phylogenetic profiles
| Â | Â | Â | Phylogenetic distribution of BLAST best-hit | |||||
|---|---|---|---|---|---|---|---|---|
|  |  | No. of proteins†| Streptococcus Species 1 | Bacilli species 2 | Firmicutes Species 3 | Bacteria Species 4 | Archaea Species | Eukaryota Species |
Main genomic group | Cluster 1 | 1313 (225,95) | 1101 (173,70) | 146 (70,13) | 22 (7,6) | 28 (7,5) | 1 (0,1) | 3 (1,0) |
Secondary genomic groups | Total | 154 (35,18) | 31 (9,2) | 22 (6,3) | 9 (6,4) | 10 (4,2) | 2 (0,1) | 1 (0,0) |
| Â | Cluster 4 | 125 (23,14) | 19 (6,0) | 14 (1,2) | 5 (4,3) | 7 (2,2) | 2 (0,1) | 1 (0,0) |
| Â | Cluster 14 | 18 (8,2) | 9 (2,1) | 4 (3,0) | 2 (2,1) | 2 (1,0) | 0 | 0 |
| Â | Cluster 19 | 11 (4,2) | 3 (1,1) | 4 (2,1) | 2 (0,0) | 1 (1,0) | 0 | 0 |
Not in genomic groups | Â | 239 (67,23) | 58 (16,3) | 86 (21,13) | 9 (4,1) | 21 (4,0) | 3 (1,2) | 3 (1,0) |