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Table 8 PART rules generated by decision trees using C 4.5a

From: Prediction of protein-protein interaction types using association rule based classification

#b

Rules discovered by C4.5 Decision Tree

Type

Conf

Supp

Corresponding rulesc

5

AVGASA > 68.73025 AND nAtom > 60 AND LCS > 2.61 AND Strand ≤ 32.857 AND SCOPClass = 7

ENZ

1

0.03

35, 5, 3, 36

38

sRatio ≤ 29.411765 AND HH > 0.277096 AND SCOPClass = 2 AND Strand > 16.949 AND Strand > 21.324 AND nSSE > 10

ENZ

1

0.02

40, 39

4

Loop > 50.299 AND nAtom > 60 AND Helix ≤ 33.636 AND AVGASA ≤ 41.137133

ENZ

0.99

0.07

35, 6

27

inPro ≤ 2.016077 AND Helix > 48.485 AND LCS > 1.727 AND Strand ≤ 8.571 AND SCOPClass = 1 AND AVGASA ≤ 53.133

nonENZ

1

0.02

8, 10

40

SCOPClass = 1 AND Strand ≤ 2.26

nonENZ

1

0.01

15

1

nAtom > 189 AND Loop ≤ 66.316 AND nSSE > 13 AND Helix ≤ 19.481 AND sRatio ≤ 80.833 AND inPro > -1.570 AND LCS > 3.714 AND Loop ≤ 46.7

HET

1

0.05

20, 21

3

nAtom > 212 AND Strand ≤ 10.738 AND nSSE > 13 AND inPro > -1.476973 AND nAtom > 384

HET

1

0.05

20, 18, 19

34

SCOPClass = 3 AND Helix > 18.421

HOM

1

0.02

25

15

HH > 0.433 AND AVGASA > 55.984 AND nAA ≤ 34

HOM

1

0.01

27

  1. a: A total of 44 rules produced by a decision tree using C4.5 algorithm in WEKA machine learning library;
  2. b#: PART rule identifier;
  3. cCorresponding rules: Association rule identifiers (Tables 6, 7 and 8) corresponding to a PART rule.