From: DISPARE: DIScriminative PAttern REfinement for Position Weight Matrices
Different sets of matrix wma | |||
---|---|---|---|
Set 1 | 1000 sequences (500 test + 500 training) and 2 × 500 background sequences | 1000 nucleotides | 60% GC |
Set 2 | 1000 sequences (500 test + 500 training) and 2 × 500 background sequences | 2000 nucleotides | 60% GC |
Set 3 | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 1000 nucleotides | 50% GC |
Set 4 | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 10000 nucleotides | 60% GC |
Set 5 | 400 sequences (200 test + 200 training) and 2 × 200 background sequences | 10000 nucleotides | 50% GC |