Table 2 Global properties of the genome domain architecture network
Genome/s | Domains | Degree | Clustering Coefficient | Density | Path Length |
|---|---|---|---|---|---|
all genomes | 1070 | 3.59 (3.59) | 0.1390 (21.9) | 57.74 (5.0) | 3.87 (2.0) |
archaea | 424 | 1.12 (1.12) | 0.0760 (19.1) | 9.57 (3.2) | 4.99 (1.1) |
bacteria | 794 | 2.20 (2.20) | 0.0965 (18.5) | 40.57 (2.5) | 4.53 (2.6) |
eukaryotes | 890 | 2.65 (2.65) | 0.1306 (22.8) | 49.32 (4.9) | 4.33 (6.3) |
unicellular eukaryotes | 341 | 0.88 (0.88) | 0.0504 (18.9) | 3.23 (1.1) | 4.18 (1.1) |
multicellular eukaryotes | 739 | 1.89 (1.89) | 0.1186 (24.0) | 33.12 (6.9) | 4.73 (1.5) |
Saccharomyces cerevisiae | 193 | 0.72 (0.72) | 0.0415 (16.0) | 1.09 (1.6) | 2.32 (1.3) |
Escherichia coli | 343 | 0.86 (0.86) | 0.0389 (15.7) | 4.26 (0.3) | 5.53 (0.5) |
Caenorhabditis elegans | 317 | 0.81 (0.81) | 0.0592 (21.0) | 2.65 (0.9) | 5.38 (0.4) |
Homo sapiens 22.34d | 389 | 0.99 (0.99) | 0.0639 (21.5) | 10.62 (1.0) | 7.30 (1.3) |
Mus musculus 22.32b | 416 | 1.02 (1.02) | 0.0807 (25.7) | 10.66 (0.7) | 7.80 (1.4) |