Figure 5
From: An efficient algorithm for the stochastic simulation of the hybridization of DNA to microarrays
Computational performance of the Method of Partial Sums and Next Reaction Method. CPU times for of simulations of hybridization until equilibrium are illustrated. The in silico time t required to establish equilibrium is determined by our method and utilized as an end point in "Next Reaction" simulations. Our algorithm outperforms the Next Reaction Method in both absolute terms as well as on a per-probe basis (frame).