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Table 3 Cross-species testing results

From: Critical assessment of sequence-based protein-protein interaction prediction methods that do not require homologous protein sequences

 

Human - Yeast1 100N

Yeast - Human 100N

 

AUC

P20R

AUC

P20R

M1

0.67

0.03

0.65

0.03

M2

0.72

0.06

0.67

0.04

M3

0.52

0.02

0.51

0.01

M4

0.62

0.02

0.62

0.02

C

0.73

0.07

0.68

0.04

  1. 1"A - B" signifies training with the A data and testing on the B data.
  2. In this Table, prediction methods were trained with all the data from one species and tested on all the data from another species (no 4-fold cross-validation).
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BMC Bioinformatics

ISSN: 1471-2105

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