Table 1 Sequence features
From: In silico method for systematic analysis of feature importance in microRNA-mRNA interactions
Feature | Description |
|---|---|
N_frac | Four features, percentage of A U C G nucleotides in the target sequence |
GC_frac | Percentage of GC content in the target sequence |
nt_match | Percentage of matching bases in the target sequence |
nt_GUmatch | Percentage of GU matching bases in the target sequence |
nt_mismatch | Percentage of mismatch bases in the target sequence |
Dinucleotides | 16 features, number of dinucleotide counts in the target sequence |
Trinucleotides | 64 features, number of trinucleotide counts in the target sequence |