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Table 10 Dihedral prediction on PDB-Select25 dataset.

From: Prediction of backbone dihedral angles and protein secondary structure using support vector machines

PDB-Select25

 

Subset1

Subset2

NC

EM (%)

k-Means (%)

EM (%)

k-Means (%)

2

82.9

83.0

82.5

83.1

3

79.0

79.0

78.9

79.1

4

74.6

71.5

74.2

72.1

5

59.8

57.3

59.5

57.5

6

58.9

53.4

58.4

53.5

7

48.6

48.0

48.5

47.8

  1. Columns two and three show the predictions for subset1 when SVMs are trained using subset2 and the converse is shown in columns four and five.
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BMC Bioinformatics

ISSN: 1471-2105

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