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Table 3 Percentage of correct entries in inferred truth tables for the S. cerevisiae mitotic cell-cycle network.

From: IRIS: a method for reverse engineering of regulatory relations in gene networks

   

True Table vs IRIS Inferred TT

Regulated Gene

Regulator Genes

TT Size

Correct

Incorrect

Undefined

CDC28

CLN3

2

2

0

0

MBP1

SWI6

2

2

0

0

CLN1

CLN3

2

1

0

1

CDC6

CLB5

2

2

0

0

CLN2

CLN1 SWI6

4

4

0

0

CLB 5

SWI6 MBP1 CLB6

8

7

0

1

SWI6

CLN2 CLN3

4

2

2

0

CLB6

SIC1 MBP1 CLB5

8

6

1

1

SWI4

CLN1 CLN2 CLN3

8

6

1

1

SIC1

CLN1 CLN2

4

1

2

1

Total

44

33

6

5

Percentage

75%

13.64%

11.36%

  1. This table follows the same schema as for Table 1.