Table 2 Log-fold changes of RT-PCR, ILM and RMA for lab 2 and 4
From: Inverse Langmuir method for oligonucleotide microarray analysis
| Â | Â | Lab. 2 | Lab. 4 | ||||||
|---|---|---|---|---|---|---|---|---|---|
Gene | RT-PCR | ILM1 | ILM2 | RMA1 | RMA2 | ILM1 | ILM2 | RMA1 | RMA2 |
PEX1 | 0.27 | 0.05 | 0.13 | 0.1 | 0.08 | -0.48 | 0.39 | 0.01 | 0.12 |
PEX6 | 0.98 | 0.67 | 0.16 | 0.44 | 0.15 | 0.46 | 0.36 | 0.52 | 0.58 |
PEX7 | 0.08 | -0.31 | -0.19 | -0.1 | -0.07 | -0.19 | -0.44 | -0.18 | -0.11 |
PEX12 | -0.12 | -0.43 | -0.55 | -0.21 | -0.14 | -0.25 | -0.18 | -0.17 | -0.14 |
BMP7 | 0 | 0.08 | 0.15 | -0.05 | 0.07 | -0.03 | -0.18 | -0.02 | -0.06 |
CUL3 | -0.11 | 0.19 | 0.31 | 0.08 | 0.44 | 0.18 | 0.14 | 0.08 | 0.22 |
FAF1 | 0.03 | 0.04 | 0.08 | -0.17 | 0.04 | 0.02 | -0.19 | 0.03 | -0.08 |
MFNG | -0.12 | 0.32 | 0.06 | 0.15 | -0.04 | -0.39 | -0.17 | -0.29 | 0.05 |
MMP3 | 4.16 | 5.2 | 5.44 | 3.29 | 3.76 | 4.21 | 4.13 | 3.51 | 3.47 |
PLAU | 2.46 | 3.1 | 3.43 | 1.94 | 2.09 | 2.8 | 2.55 | 2.11 | 1.88 |
EFEMP1 | -1.88 | -1.7 | -1.82 | -1.58 | -1.6 | -1.13 | -0.99 | -1.06 | -1.01 |
COL5A2 | -1.95 | -1.77 | -1.63 | -1.06 | -1.21 | -1.33 | -1.64 | -1.15 | -1.07 |
IL8 | 1.67 | 0.86 | 1.07 | 0.95 | 1.05 | 0.55 | 1.5 | 0.98 | 1.13 |
SEMA3F | 1.34 | -0.26 | -0.42 | 0.12 | 0.16 | -0.19 | -0.1 | 0 | 0.08 |
ALOX5 | - | -0.25 | 0.1 | -0.16 | 0.2 | -0.12 | -0.59 | -0.09 | 0 |
RNF167 | 0.35 | 0.5 | -0.02 | 0.13 | -0.06 | 0.31 | 0.02 | 0.13 | -0.01 |