Table 6 Genes selected by the iterative BMA algorithm and their corresponding posterior probabilities, univariate log likelihood rankings, and descriptions on the DLBCL dataset (p = 1000, nbest = 50, maxNvar = 25, and cutPoint = 60).
Selected genes | Posterior Probability (%) | Univariate Cox ranking | Gene description |
|---|---|---|---|
BC012161 | 100.0 | 1 | septin 1 |
D42043 | 100.0 | 4 | KIAA0084 protein |
X53505 | 100.0 | 41 | ribosomal protein S12 |
BF129543 | 100.0 | 49 | ESTs, weakly similar to A47224 thyroxine-binding globulin precursor |
D13666 | 100.0 | 73 | osteoblast specific factor 2 (fasciclin I-like) |
M83664 | 100.0 | 93 | MHC, class II, DP beta I |
AK000978 | 100.0 | 101 | hypothetical protein FLJ10116 |
AF009615 | 100.0 | 116 | a disintegrin and metallo- proteinase domain 10 |
AK027711 | 100.0 | 123 | hypothetical protein MGC3234 |
LC_24015 | 100.0 | 129 | no description available |
K01144 | 100.0 | 140 | CD74 antigen (invariant polypeptide of MHC, class II antigen associated) |
U68418 | 100.0 | 181 | branched chain aminotransferase 2 |
D88532 | 100.0 | 213 | phosphoinositide-3-kinase, regulatory subunit, polypeptide 3 (p55, gamma) |
NM_022551 | 100.0 | 223 | ribosomal protein S18 |
U18259 | 100.0 | 242 | MHC, class II transactivator |
X64707 | 100.0 | 243 | ribosomal protein L13 |
NM_006312 | 100.0 | 278 | nuclear receptor co- repressor 2 |
M58297 | 100.0 | 385 | zinc finger protein 42 (myeloid- specific retinoic acid-responsive) |
LC_26524 | 100.0 | 473 | no description available |
AK022743 | 100.0 | 499 | hypothetical protein FLJ12681 |
NM_005347 | 100.0 | 518 | heat shock 70 kDa protein 5 (glucose-regulated protein 78 kDa) |
D83492 | 100.0 | 632 | EphB |
AK025754 | 100.0 | 652 | HP1-BP74 |
AA747694 | 81.7 | 885 | ESTs, weakly similar to ALU SUBF J |
U70981 | 9.2 | 1000 | interleukin 13 receptor, alpha 2 |