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Table 5 A performance comparison of the genetic algorithm and the random search

From: TCP: a tool for designing chimera proteins based on the tertiary structure information

Chain

GA

Random

 

%CV

Time

%CV

Time

1EVT:A

3.8

85.4

3.9

239.1

1EVT:C

8.2

168.7

9.2

353.7

1TNR:A

3.6

137.1

8.1

264.2

1TNR:R

3.3

137.3

8.2

254.4

1YYH:A

2.2

167.7

3.6

344.2

Average

4.2

139.2

6.6

291.1

  1. The %CV of the eight portions divided by the best CS set and the execution times (seconds) are shown. The tests were repeated ten times by a personal computer with a 2.4 GHz Celeron D processor and 1,024 Mb RAM, and the results were averaged.
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BMC Bioinformatics

ISSN: 1471-2105

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