Protein | Assignments | Rank | Topology | Shift | Rot | CE | RMSD |
|---|
1LRE | 32066 | 17 | 123000 | [1, 0, 1] | [5.76, 3.14, 1.57] | -2.004894 | 4.781 |
1JW2A | 391833 | 31 | 12340000 | [-1, -1, 1, 0] | [0, 0, 3.66, 5.76] | -1.751024 | 4.718 |
1DP3A | 98755 | 16 | 123000 | [-1, 0, -1] | [4.71, 5.23, 1.05] | -2.414033 | 4.341 |
1GXGA | 192935 | 5 | 124000 | [-1, 0, 1] | [5.23, 3.66, 2.09] | -2.784552 | 4.665 |
- Protein: the PDB Id;
- Assignments: the total number of assignments with the negative contact energy
- Rank: the rank of the structure with the smallest RMSD to native;
- Topology: the topology Id, the 1st half of the digits: permutation of the assignment, the last half of the digits: directions (0 or 1) of the assignment for each helix;
- Shift: the amino acid position shift from the true helix segment for each assignment, "-" left, "+" right;
- Rot: rotation angle around the skeleton axis for each helix, in radian;
- CE: Effective contact energy of the constructed helices;
- RMSD: the root mean square deviation of the Cα atoms between the constructed candidate structure and the native structure, in Å.
