Table 2 Exemplary set of types. The set of data types that was used in the example processes.
From: Bio-jETI: a framework for semantics-based service composition
Type | Description |
|---|---|
Accession | Single accession number. |
AccessionList | Iteratable (java.util.)list of accession numbers. |
Accessions | Concatenation of accession numbers, separated by some character. |
Alignment | Multiple sequence alignment. |
BlastResult | Tool output of BLAST. |
ClustalWResult | Tool output of ClustalW. |
Counter | Counter, i.e. positive integer value. |
DDBJEntry | DDBJ entry in flat file format. |
Limit | Limit, i.e. positive integer value. |
Sequence | Single or multiple nucleic or amino acid sequences. |
Tree | Phylogenetic tree. |