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Table 3 Prediction performance of KnowPredsite, ngLOC, and Blast-hit

From: Protein subcellular localization prediction of eukaryotes using a knowledge-based approach

Overall Accuracy(%) Methods Top 1 Top 2 Top 3 Top 4
Single-localized *KnowPredsite 92.0 95.7 96.8 98.1
  #KnowPredsite 91.7 95.4 96.6 97.9
  ngLOC 88.8 92.2 94.5 96.3
  Blast-hit 86.0 - - -
Multi-localized (at least 1 correct) *KnowPredsite 90.8 96.4 98.2 98.9
  #KnowPredsite 90.1 96.1 98.1 98.9
  ngLOC 81.9 92.0 96.1 97.4
  Blast-hit 78.8 - - -
Multi-localized (both correct) *KnowPredsite   74.3 83.3 88.7
  #KnowPredsite   72.1 82.2 87.5
  ngLOC   59.7 73.8 83.2
  Blast-hit   45.7 - -
  1. *KnowPredsite represents the experiment result using leave-one-out cross validation; #KnowPredsite represents the experiment result using 10-fold cross validation.